Introduction to Genomics for Engineers
A guided, intuitive introduction to genomics for software engineers.
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The guide
- 01Biological Foundations, 6 pages, about 30 min
- 02Cancer Biology, 7 pages, about 50 min
- 03Genomic Variation, 7 pages, about 35 min
- 04Next-Generation Sequencing, 14 pages, about 1 hr 5 min
- Introduction2 min
- Samples and Extraction5 min
- Library Preparation9 min
- Short-Read Sequencing6 min
- Long-Read Sequencing5 min
- Common Types of Sequencing: Introduction4 min
- Common Types of Sequencing: Whole-Genome Sequencing (WGS)3 min
- Common Types of Sequencing: Whole-Exome Sequencing (WES)3 min
- Common Types of Sequencing: RNA Sequencing (RNA-seq)6 min
- Common Types of Sequencing: Targeted Sequencing3 min
- Common Types of Sequencing: Chromatin Immunoprecipitation Sequencing (ChIP-seq)5 min
- Common Types of Sequencing: Assay for Transposase-Accessible Chromatin Using Sequencing (ATAC-seq)3 min
- Common Types of Sequencing: Hi-C5 min
- Common Types of Sequencing: Single-Cell Sequencing4 min
- 05From Reads to Variants, 7 pages, about 40 min
- 06Genomic File Formats, 8 pages, about 1 hr 5 min
- 07Advanced Topics, 4 pages, about 40 min
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